micone package

Subpackages

• micone.conversion package
  • Submodules
  • micone.conversion.network_converter module
  • micone.conversion.otu_converter module
  • micone.conversion.taxmetadata_converter module
  • Module contents
• micone.logging package
  • Submodules
  • micone.logging.logger module
  • Module contents
• micone.main package
  • Submodules
  • micone.main.lineage module
  • micone.main.network module
  • micone.main.network_group module
  • micone.main.otu module
  • Module contents
• micone.pipelines package
  • Submodules
  • micone.pipelines.command module
  • micone.pipelines.helpers module
  • micone.pipelines.pipeline module
  • micone.pipelines.process module
  • micone.pipelines.template module
  • Module contents
• micone.setup package
  • Submodules
  • micone.setup.environments module
  • Module contents
• micone.utils package
  • Submodules
  • micone.utils.spinner module
  • Module contents
• micone.validation package
  • Submodules
  • micone.validation.network_schema module
  • micone.validation.otu_schema module
  • micone.validation.otu_validator module
  • Module contents

Submodules

micone.cli module

Console script for micone

micone.cli.main()

micone.micone module

Main module

Module contents

Top-level package for Microbial Interaction Database Pipeline.