Welcome to MiCoNE’s documentation!

• MiCoNE - Microbial Co-occurrence Network Explorer
  • Features
  • Know issues
  • Credits
• Installation
  • From anaconda (complete pipeline)
  • From pip (only Python package)
  • From sources (only Python package)
• Usage
  • Workflow
  • Usage
  • Configuration and the pipeline template
  • Visualization of results (coming soon)
  • Configuring the pipeline
• Data Import and Export (Python API)
  • 1. Importing a network from a Table
  • 2. Importing a network from an edge list
  • 3. Exporting your Network object into JSON file
• micone
  • micone package
• Contributing
  • Types of Contributions
  • Get Started!
  • Pull Request Guidelines
  • Tips
  • Deploying
• Credits
  • Development Lead
  • Contributors
• Changelog
  • 0.11.6 (2022-04-05)
  • 0.11.5 (2022-03-28)
  • 0.11.3 (2022-01-12)
  • 0.11.2 (2022-01-12)
  • 0.11.1 (2022-01-11)
  • 0.11.0 (2021-12-16)
  • 0.10.4 (2021-12-04)
  • 0.10.3 (2021-12-03)
  • 0.10.2 (2021-12-01)
  • 0.10.0 (2021-11-23)
  • 0.9.0 (2021-10-30)
  • 0.7.0 (2021-03-04)
  • 0.6.0 (2021-02-04)
  • 0.5.0 (2019-01-02)
  • 0.4.2 (2018-10-08)
  • 0.4.1 (2018-10-08)
  • 0.4.0 (2018-10-06)
  • 0.3.0 (2018-08-28)
  • 0.2.4 (2018-08-23)
  • 0.2.3 (2018-08-23)
  • 0.2.2 (2018-08-22)
  • 0.2.1 (2018-08-17)
  • 0.2.0 (2018-08-17)
  • 0.1.0 (2018-06-30)

Indices and tables

• Index

• Module Index

• Search Page